Laboratories for Mathematics, Lifesciences, and Informatics

Papers (2011-)

  1. Bing Wang, Lang Cao, Hideyuki Suzuki, and Kazuyuki Aihara: "Epidemic Spread in Adaptive Networks with Multitype Agents," Journal of Physics A: Mathematical and Theoretical, Vol.44, No.3, 035101 (2011).
  2. Hiroyasu Ando, Sudeshna Sinha, Remo Storni, and Kazuyuki Aihara: "Synthetic Gene Networks as Potential Flexible Parallel Logic Gates," Europhysics Letters, Vol.93, No.5, 50001-p1-p6 (2011).
  3. Lang Cao, Hisashi Ohtsuki, Bing Wang and Kazuyuki Aihara: "Evolution of Cooperation on Adaptively Weighted Networks," Journal of Theoretical Biology, Vol.272, No.1, pp.8-15 (2011).
  4. Yoshito Hirata, Yuko Shimo, Hiroshi L. Tanaka, and Kazuyuki Aihara: "Chaotic Properties of the Arctic Oscillation Index," Scientific Online Letters on the Atmosphere (SOLA), Vol.7, pp.33-36 (2011).
  5. Ikkyu Aihara, Ryu Takeda, Takeshi Mizumoto, Takuma Otsuka, Toru Takahashi, Hiroshi G. Okuno, and Kazuyuki Aihara: "Complex and Transitive Synchronization in a Frustrated System of Calling Frogs," Physical Review E, Vol.83, 031913 (2011).
  6. Yoshito Hirata and Kazuyuki Aihara: "Statistical Tests for Serial Dependence and Laminarity on Recurrence Plots," International Journal of Bifurcation and Chaos, Vol.21, No.4, pp.1077-1084 (2011).
  7. Yang Chen and Kazuyuki Aihara: "Some Convex Functions Based Measures of Independence and Their Application to Strange Attractor Reconstruction," Entropy, Vol.13, No.4, pp.820-840 (2011).
  8. Yoshiyuki Sato and Kazuyuki Aihara: "A Bayesian Model of Sensory Adaptation," PLoS ONE, Vol.6, No.4, e19377 (2011).
  9. Zhijie Wang, Hong Fan, and Kazuyuki Aihara: "Three Synaptic Components Contributing to Robust Network Synchronization," Physical Review E, Vol.83, No.5, 051905 (2011).
  10. Kai Morino, Gouhei Tanaka, and Kazuyuki Aihara: "Robustness of multilayer oscillator networks," Physical Review E, Vol.83, No.5, 056208 (2011).
  11. C. Cheong Took, G. Strbac, K. Aihara, D.P. Mandic: "Quaternion-valued Short-term Joint Forecasting of Three-dimensional Wind and Atmospheric Parameters," Renewable Energy, Vol.36, No.6, pp.1754-1760 (2011).
  12. Kunichika Tsumoto, Gen Kurosawa, Tetsuya Yoshinaga, and Kazuyuki Aihara: "Modeling Light Adaptation in Circadian Clock: Prediction of the Response That Stabilizes Entrainment," PLoS ONE, Vol.6, No.6, e20880 (2011).
  13. Takeshi Mizumoto, Ikkyu Aihara, Takuma Otsuka, Ryu Takeda, Kazuyuki Aihara, and Hiroshi G. Okuno: "Sound Imaging of Nocturnal Animal Calls in their Natural Habitat," Journal of Comparative Physiology A, Vol.197, No.9, pp.915-921 (2011).
  14. Tsuyoshi Okamoto, Koji Ikezoe, Hiroshi Tamura, Masataka Watanabe, Kazuyuki Aihara, and Ichiro Fujita: "Predicted Contextual Modulation Varies with Distance from Pinwheel Centers in the Orientation Preference Map," Scientific Reports, Vol.1, No.114, pp.1-11 (2011).
  15. Graziano Chesi, Luonan Chen, and Kazuyuki Aihara: "On the robust stability of time-varying uncertain genetic regulatory networks," International Journal of Robust and Nonlinear Control, Vol.21, pp.1778-1790 (2011).
  16. Lang Cao, Xun Li, Bing Wang, and Kazuyuki Aihara: "Rendezvous Effects in the Diffusion Process on Bipartite Metapopulation Networks," Physical Review E, Vol.84, No.4, 041936 (2011).
  17. Yuichi Katori, Kazuhiro Sakamoto, Naohiro Saito, Jun Tanji, Hajime Mushiake, Kazuyuki Aihara: "Representational Switching by Dynamical Reorganization of Attractor Structure in a Network Model of the Prefrontal Cortex," PLoS Computational Biology, Vol.7, No.11, e1002266, pp.1-17 (2011).
  18. Hiroaki Kuramae, Yoshito Hirata, Nicholas Bruchovsky, Kazuyuki Aihara, and Hideyuki Suzuki: "Nonlinear Systems Identification by Combining Regression with Bootstrap Resampling," Chaos, Vol.21, No.4, 043121-1-12 (2011).
  19. Shinji Nakaoka and Kazuyuki Aihara: "Mathematical Study on Kinetics of Hematopoietic Stem Cells --Theoretical Conditions for Successful Transplantation," Journal of Biological Dynamics, Vol.6, No.2, pp.836-854 (2012).
  20. Yang Li, Ping Zhu, Xiaoping Xie, Guoguang He, and Kazuyuki Aihara: "Learning-induced Pattern Classification in a Chaotic Neural Network," Physics Letters A, Vol.376, pp.412-417 (2012).
  21. Gouhei Tanaka, Kai Morino, and Kazuyuki Aihara: "Dynamical Robustness in Complex Networks: The Crucial Role of Low-degree Nodes," Scientific Reports, Vol.2, No.232, pp.1-6 (2012).
  22. Yoshito Hirata and Kazuyuki Aihara: "Timing Matters in Foreign Exchange Markets," Physica A, Vol.391, No.3, pp.760-766 (2012).
  23. Remo Storni, Hiroyasu Ando, Kazuyuki Aihara, K. Murali, and Sudeshna Sinha: "Manipulating Potential Wells in Logical Stochastic Resonance to Obtain XOR Logic," Physics Letters A, Vol.376, No.8-9, pp.930-937 (2012).
  24. Yoshito Hirata, Gouhei Tanaka, Nicholas Bruchovsky and Kazuyuki Aihara: "Mathematically Modelling and Controlling Prostate Cancer under Intermittent Hormone Therapy," Asian Journal of Andrology, Vol.14, pp.270--277 (2012).
  25. L. Chen, R Liu, Z.-P. Liu, M. Li, and K. Aihara: ¡ÈDetecting Early-warning Signals for Sudden Deterioration of Complex Diseases by Dynamical Network Biomarkers,¡É Scientific Reports, Vol.2, No.342, pp.1-8 (2012).
  26. Isao Nishikawa, Gouhei Tanaka, Takehiko Horita, and Kazuyuki Aihara: "Long-term Fluctuations in Globally Coupled Phase Oscillators with General Coupling: Finite Size Effects," Chaos, Vol.22, No.1, 013133-1-10 (2012).
  27. Keisuke Ejima, Ryosuke Omori, Kazuyuki Aihara, and Hiroshi Nishiura: "Real-time Investigation of Measles Epidemics with Estimate of Vaccine Efficacy," International Journal of Biological Sciences, Vol.8, No.5, pp.620-629 (2012).
  28. Takashi Kanamaru and Kazuyuki Aihara: "Rewiring-Induced Chaos in Pulse-Coupled Neural Networks," Neural Computation, Vol.24, No.4, pp.1020-1046 (2012).
  29. Takahito Mitsui, Seiji Uenohara, Takashi Morie, and Kazuyuki Aihara: "Torus-doubling Process via Strange Nonchaotic Attractors," Physics Letters A, Vol.376, No.24-25, pp.1907-1914(2012).
  30. Koji Iwayama, Yoshito Hirata, Kohske Takahashi, Katsumi Watanabe, Kazuyuki Aihara, and Hideyuki Suzuki: "Characterizing Global Evolutions of Complex Systems via Intermediate Network Representations," Scientific Reports, Vol.2, Article No.423, pp.1-5 (2012).
  31. Yoshito Hirata, Koichiro Akakura, Celestia S. Higano, Nicholas Bruchovsky, and Kazuyuki Aihara: "Quantitative Mathematical Modeling of PSA Dynamics of Prostate Cancer Patients Treated with Intermittent Androgen Suppression," Journal of Molecular Cell Biology, Vol.4, No.3, pp.127-132 (2012).
  32. Yoshito Hirata and Kazuyuki Aihara:"Describing High-dimensional Dynamics with Low-dimensional Piecewise Affine Models: Applications to Renewable Energy," Chaos, Vol.22, No.2, 023143-1-6 (2012).
  33. Makito Oku and Kazuyuki Aihara: "Numerical Analysis of Transient and Periodic Dynamics in Single and Coupled Nagumo-Sato Models," International Journal of Bifurcation and Chaos, Vol.22, No.6, 1230021-1-15 (2012).
  34. Munehisa Sekikawa, Naohiko Inaba, Takashi Tsubouchi, and Kazuyuki Aihara: "Novel Bifurcation Structure Generated in Piecewise-linear Three-LC Resonant Circuit and its Lyapunov Analysis," Physica D, Vol.241, No.14, pp.1169-1178 (2012).
  35. Masanori Ikeda, Yoshihiko Horio, Kazuyuki Aihara: "Improved Dynamical Logic Element with Chaotic State Transitions Using Switched-Capacitor Chaotic Neuron Circuit," Journal of Signal Processing, Vol.16, No.4, pp.291-294 (2012).
  36. Bing Wang, Lang Cao, Hideyuki Suzuki, and Kazuyuki Aihara: "Impacts of Clustering on Interacting Epidemics," Journal of Theoretical Biology, Vol.304, pp.121-130 (2012).
  37. Hiroyasu Ando, Hiromichi Suetani, Jürgen Kurths, and Kazuyuki Aihara: "Chaotic Phase Synchronization in Bursting-neuron Models Driven by a Weak Periodic Force," Physical Review E, Vol.86, No.1, 016205-1-11 (2012).
  38. Keisuke Ejima, Ryosuke Omori, Benjamin J. Cowling, Kazuyuki Aihara, and Hiroshi Nishiura: "The Time Required to Estimate the Case Fatality Ratio of Influenza Using Only the Tip of an Iceberg: Joint Estimation of the Virulence and the Transmission Potential," Computational and Mathematical Methods in Medicine, Vol.2012, 978901-1-10 (2012).
  39. Tohru Kohda, Yoshihiko Horio, Yoichiro Takahashi, and Kazuyuki Aihara: "Beta Encoders: Symbolic Dynamics and Electronic Implementation," International Journal of Bifurcation and Chaos, Vol.22, No.9, 1230031-1-55 (2012).
  40. Teerasit Termsaithong, Makito Oku, and Kazuyuki Aihara: "Dynamical Coherence Patterns in Neural Field Model at Criticality," Artificial Life and Robotics, Vol.17, No.1, pp.75-79 (2012).
  41. Ryo Yokota, Kazuyuki Aihara, R. Kanzaki, and H. Takahashi: "Tonotopic-column-dependent Variability of Neural Encoding in the Auditory Cortex of Rats," Neuroscience, Vol.223, pp.377-387 (2012).
  42. Hiroyuki Asahara, Kenichi Tasaki, Kazuyuki Aihara, and Takuji Kousaka: "The Stabilizing Mechanism for an Interrupted Dynamical System with Periodic Threshold," Nonlinear Theory and Its Applications, IEICE Vol.3, No.4, pp.546-556 (2012).
  43. Yuichi Katori, Yasuhiko Igarashi, Masato Okada, and Kazuyuki Aihara: "Stability Analysis of Stochastic Neural Network with Depression and Facilitation Synapses," Journal of the Physical Society of Japan, Vol.81, pp.114007-1-7 (2012).
  44. Kiyohito Nagano and Kazuyuki Aihara: "Equivalence of Convex Minimization Problems Over Base Polytopes," Japan Journal of Industrial and Applied Mathematics (JJIAM), Vol.29, No.3, pp.519-534 (2012).
  45. Ken-ichi Sawai, Yoshiyuki Sato, and Kazuyuki Aihara: "Auditory Time-interval Perception as Causal Inference on Sound Sources," Frontiers in Perception Science, Vol.3, Article No.524, pp.1-8 (2012).
  46. Bing Wang, Lang Cao, Hideyuki Suzuki, and Kazuyuki Aihara: "Safety-information-driven Human Mobility Patterns with Metapopulation Epidemic Dynamics," Scientific Reports, Vol.2, Article No.887, pp.1-8 (2012).
  47. Rui Liu, Meiyi Li, Zhi-Ping Liu, Jiarui Wu, Luonan Chen, and Kazuyuki Aihara: "Identifying Critical Transitions and their Leading Biomolecular Networks in Complex Diseases," Scientific Reports, Vol.2, Article No.813, pp.1-9 (2012).
  48. Timothee Leleu and Kazuyuki Aihara: "Combined Effects of LTP/LTD and Synaptic Scaling in Formation of Discrete and Line Attractors with Persistent Activity from Non-trivial Baseline," Cognitive Neurodynamics, Vol.6, No.6, pp.499-524 (2012).
  49. Tohru Kohda, Yoshihiko Horio, and Kazuyuki Aihara: "¦Â-expansion Attractors Observed in A/D Converters," AIP Chaos, Vol.22, No.4, 047512-1-18 (2012).
  50. Yoshito Hirata, Makito Oku, and Kazuyuki Aihara: "Chaos in Neurons and its Application: Perspective of Chaos Engineering," AIP Chaos, Vol.22, No.4, 047511-1-7 (2012).
  51. G. Tanaka and K. Aihara: "Effects of Seasonal Variation Patterns on Recurrent Outbreaks in Epidemic Models," Journal of Theoretical Biology, Vol.317, pp.87-95 (2013).
  52. T. Kanamaru, H. Fujii, and K. Aihara: "Deformation of Attractor Landscape via Cholinergic Presynaptic Modulations: A Computational Study Using a Phase Neuron Model," PLOS ONE, Vol.8, No.1, e53854, pp.1-14 (2013).
  53. H. Suzuki, J. Imura, and K. Aihara: "Chaotic Ising-like Dynamics in Traffic Signals," Scientific Reports, Vol.3, Article No.1127, pp.1-6 (2013).
  54. K. Fujimoto, M. Kobayashi, T. Yoshinaga, and K. Aihara: "Identification of Target Image Regions Based on Bifurcations of a Fixed Point in a Discrete-Time Oscillator Network," International Journal of Innovative Computing, Information and Control, Vol.9, No.1, pp.355-363 (2013).
  55. M. Fukuhara, S. Iwami, K. Sato, Y. Nishimura, H. Shimizu, K. Aihara and Y. Koyanagi: ¡ÈQuantification of the Dynamics of Enterovirus 71 Infection by Experimental-mathematical Investigation,¡É Journal of Virology, Vol.87, No.1, pp.701-705 (2013).
  56. H. San, T. Kato, T. Maruyama, K. Aihara, and M. Hotta: "Non-Binary Pipeline Analog-to-digital Converter Based on ¦Â-Expansion," IEICE Transactions on Fundamentals of Electronics, Communications and Computer Sciences, Vol.E96-A, No.2, pp.415-421 (2013).
  57. Y. Katori, Y. Otsubo, M. Okada, and K. Aihara: "Stability Analysis of Associative Memory Network Composed of Stochastic Neurons and Dynamic Synapses," Frontiers in Computational Neuroscience, Vol.7, Article 6 (2013).
  58. S. Nakaoka and K. Aihara: "Stochastic Simulation of Structured Skin Cell Population Dynamics," Journal of Mathematical Biology, Vol.66, No.4-5, pp.807-835 (2013).
  59. K. Ejima, K. Aihara, and H. Nishiura: ¡ÈModeling the Obesity Epidemic: Social Contagion and its Implications for Control,¡É Theoretical Biology and Medical Modelling Vol.10, Article No.17, pp.1-13 (2013).
  60. B. Zhang, L. Chen, and K. Aihara: "Incremental Stability Analysis of Stochastic Hybrid Systems," Nonlinear Analysis: Real World Applications, Vol.14, No.2, pp.1225-1234 (2013).
  61. R. Fujie, K. Aihara, and N. Masuda: "A Model of Competition among More Than Two Languages," Journal of Statistical Physics, Vol.151, pp.289-303 (2013).
  62. K. Iwayama, Y. Hirata, H. Suzuki, and K. Aihara: ¡ÈChange-point Detection with Recurrence Networks,¡É Nonlinear Theory and Its Applications, IEICE, Vol.4, No.2, pp.160-171 (2013).
  63. R. Suzuki, T. Maruyama, H. San, K. Aihara, and M. Hotta: ¡ÈRobust Cyclic-ADC Architecture Based on ¦Â-Expansion,¡É IEICE Transactions on Electronics, Vol.E96-C, No.4, pp.553-559 (2013).
  64. H. Suzuki, J. Imura, Y. Horio, and K. Aihara: ¡ÈChaotic Boltzmann Machines,¡É Scientific Reports, Vol.3, Article No.1610, pp.1-5 (2013).
  65. K. Ejima, K. Aihara, and H. Nishiura: ¡ÈThe Impact of Model Building on the Transmission Dynamics under Vaccination: Observable (Symptom-Based) versus Unobservable (Contagiousness-Dependent) Approaches,¡É PLOS ONE, Vol.8, No.4, e62062, pp.1-10 (2013).
  66. K. Sasahara, Y. Hirata, M. Toyoda, M. Kitsuregawa, and K. Aihara: ¡ÈQuantifying Collective Attention from Tweet Stream,¡É PLOS ONE, Vol.8, No.4, e61823, pp.1-10 (2013).
  67. T. Mitsui and K. Aihara: "Dynamics between Order and Chaos in Conceptual Models of Glacial Cycles," Climate Dynamics, Vol.42, No.11-12, pp.3087-3099 (2013).
  68. Kazuyuki Aihara, Kazufumi Ito, Junichi Nakagawa, and Tomoya Takeuchi: "Optimal Control Laws for Traffic Flow," Applied Mathematics Letters, Vol.26, pp.617-623 (2013).
  69. S. Uenohara, T. Mitsui, Y. Hirata, T. Morie, Y. Horio, and K. Aihara: "Experimental Distinction between Chaotic and Strange Nonchaotic Attractors on the Basis of Consistency," Chaos, Vol.23, No.2, pp.023110-1-9 (2013).
  70. R. Liu, K. Aihara, and L. Chen: ¡ÈDynamical Network Biomarkers for Identifying Critical Transitions of Biological Processes,¡É Quantitative Biology, Vol.1, No.2, pp.105-114 (2013).
  71. Y. Hirata and K. Aihara: "Estimating Optimal Partitions for Stochastic Complex Systems," European Physical Journal Special Topics, Vol.222, No.2, pp.303-315 (2013).
  72. T. Kohno and K. Aihara: "Improving Noise Resistance of Intrinsic Rhythms in a Square-wave Burster Model," Biosystems, Vol.112, No.3, pp.276-283 (2013).
  73. T. Suzuki and K. Aihara: ¡ÈNonlinear System Identification for Prostate Cancer and Optimality of Intermittent Androgen Suppression Therapy,¡É Mathematical Biosciences, Doi: 10.1016/j.mbs.2013.04.007 (2013).
  74. Y. Li, P. Zhu, X. Xie, H. Chen, K. Aihara, and G. He: ¡ÈControlling a Chaotic Neural Network for Information Processing,¡É Neurocomputing, Vol.110, pp.111-120 (2013).
  75. K. Ejima, K. Aihara, and H. Nishiura: ¡ÈOn the Use of Chance-adjusted Agreement Statistic to Measure the Assortative Transmission of Infectious Diseases,¡É Computational and Applied Mathematics, Vol.32, No.2, pp.303-313 (2013).
  76. T. Omi, Y. Ogata, Y. Hirata, and K. Aihara: ¡ÈForecasting Large Aftershocks within One Day after the Main Shock,¡É Scientific Reports, Vol.3, Article No.2218, pp.1-7 (2013).
  77. B. Wang, H. Suzuki, and K. Aihara: ¡ÈEvaluating Roles of Nodes in Optimal Allocation of Vaccines with Economic Considerations,¡É PLOS ONE, Vol.8, No.8, e70793-1-9 (2013).
  78. M.A. Dahlem, S. Rode, A. May, N. Fujiwara, Y. Hirata, K. Aihara, and J. Kurths: ¡ÈTowards Dynamical Network Biomarkers in Neuromodulation of Episodic Migraine,¡É Translational Neuroscience, Vol.4, No.3, pp.282-294 (2013).
  79. I. Nishikawa, G. Tanaka, and K. Aihara: ¡ÈNonstandard Scaling Law of Fluctuations in Finite-size Systems of Globally Coupled Oscillators,¡É Physical Review E, Vol.88, No.2, 024102-1-5 (2013).
  80. K. Morino, G. Tanaka, and K. Aihara: "Efficient Recovery of Dynamic Behavior in Coupled Oscillator Networks," Physical Review E, Vol.88, No.3, 032909 (2013).
  81. M. Inoue, J. Imura, K. Kashima, and K. Aihara: "Robust Bifurcation Analysis of Systems with Dynamic Uncertainties," International Journal of Bifurcation and Chaos, Vol.23, 1350157 (2013).
  82. M. Onizuka, H. Hoang, M. Kawato, I. T. Tokuda, N. Schweighofer, Y. Katori, K. Aihara, E. J. Lang, and K. Toyama: "Solution to the Inverse Problem of Estimating Gap-junctional and Inhibitory Conductance in Inferior Olive Neurons from Spike Trains by Network Model Simulation," Neural Networks, Vol.47, pp.51-63 (2013).
  83. M. Suzuki, J. Imura, and K. Aihara: "Analysis and Stabilization for Networked Linear Hyperbolic Systems of Rationally Dependent Conservation Laws," Automatica, Vol.49, No.11, pp.3210-3221 (2013).
  84. M. Oku, T. Makino, and K. Aihara: "Pseudo-orthogonalization of Memory Patterns for Associative Memory," IEEE Transactions on Neural Networks and Learning Systems, Vol.24, No.11, pp.1877-1887 (2013).
  85. T. Ishizaki, K. Kashima, J. Imura, A. Katoh, H. Morita, and K. Aihara: "Distributed Parameter Modelling and Finite-Frequency Loop-Shaping of Electromagnetic Molding Machine," Control Engineering Practice, Vol.21, No.12, pp.1735-1743 (2013).
  86. E.P. Bravo, K. Aihara, and Y. Hirata: "Application of Joint Permutations for Predicting Coupled Time Series," Chaos, Vol.23, No.4 043104 (2013).
  87. T. Leleu and K. Aihara: "Spontaneous Slow Oscillations and Sequential Patterns due to Short-term Plasticity in a Model of the Cortex," Neural Computation, Vol.25, No.12, pp.1-52 (2013).
  88. Q. Guo, Z. Lu, Y. Hirata, and K. Aihara: "Parameter Estimation and Optimal Scheduling Algorithm for a Mathematical Model of Intermittent Androgen Suppression Therapy for Prostate Cancer," Chaos, Vol.23, No.4, 043125 (2013).
  89. K. Sakamoto, Y. Katori, N. Saito, S. Yoshida, K. Aihara, and H. Mushiake: ¡ÈIncreased Firing Irregularity as an Emergent Property of Neural-State Transition in Monkey Prefrontal Cortex,¡É PLOS ONE, Vol.8, No.12, e80906-1-26 (2013).
  90. K. Sato, N. Misawa, S. Iwami, Y. Satou, M. Matsuoka, Y. Ishizaka, M. Ito, K. Aihara, D.S. An, and Y. Koyanagi: ¡ÈHIV-1 Vpr Accelerates Viral Replication during Acute Infection by Exploitation of Proliferating CD4+ T Cells In Vivo,¡É PLOS PATHOGENS, Vol.9, No.12, e1003812-1-12 (2013).
  91. M. Suzuki, K. Katsuki, J. Imura, J. Nakagawa, T. Kurokawa, and K. Aihara: ¡ÈSimultaneous Optimization of Slab Permutation Scheduling and Heat Controlling for a Reheating Furnace,¡É Journal of Process Control, Vol.24, pp.225-238 (2014).
  92. M.A.S. Kamal, J. Imura, A. Ohata, T. Hayakawa, and K. Aihara: "Smart Driving of a Vehicle in Congested Traffic," IEEE Trans. on Intelligent Transportation Systems, Vol.15. No.2, pp.878-888 (2014)
  93. I. Aihara, T. Mizumoto, T. Otsuka, H. Awano, K. Nagira, H.G. Okuno, and K. Aihara: "Spatio-Temporal Dynamics in Collective Frog Choruses Examined by Mathematical Modeling and Field Observations," Scientific Reports, Vol.4, Article No.3891, pp.1-8 (2014).
  94. I. Nishikawa, K. Iwayama, G. Tanaka, T. Horita, and K. Aihara: ¡ÈFinite-size Scaling in Globally Coupled Phase Oscillators with a General Coupling Scheme,¡É Progress of Theoretical and Experimental Physics, Vol.2014, No.2, 023A07-1-11, DOI: 10.1093/ptep/ptu015 (2014).
  95. J.P. Ramirez, K. Aihara, R.H.B. Fey, and H. Nijmeijer: "Further Understanding of Huygens' Coupled Clocks: The Effect of Stiffness," Physica D, Vol.270, pp.11-19 (2014).
  96. T. Ishizaki, K. Kashima, J. Imura, and K. Aihara: "Model Reduction and Clusterization of Large-Scale Bidirectional Networks," IEEE Transactions on Automatic Control, Vol.59, No.1, pp.48-63 (2014).
  97. T. Omi, Y. Ogata, Y. Hirata, and K. Aihara: ¡ÈEstimating the ETAS Model from an Early Aftershock Sequence,¡É Geophysical Research Letters, Vol.41, No.3, pp.850-857 (2014).
  98. K. Ejima, K. Aihara, and H. Nishiura: ¡ÈProbabilistic Differential Diagnosis of Middle East Respiratory Syndrome (MERS) using the Time from Immigration to Illness Onset among Imported Cases,¡É Journal of Theoretical Biology, Vol.346, pp.47-53 (2014).
  99. F. Duan, K. Watanabe, Y. Yoshimura, M. Kikuchi, Y. Minabe, and K. Aihara: ¡ÈRelationship between Brain Network Pattern and Cognitive Performance of Children Revealed by MEG Signals during Free Viewing of Video,¡É Brain and Cognition, Vol.86, pp.10-16 (2014).
  100. K. Aihara and M. Hasegawa: ¡ÈOptimization, Chaotic Neural Networks, and Coherent Ising Machines [Further Thoughts],¡É Proceedings of the IEEE, Vol.102, No.4, p.585 (2014).
  101. M. Hasegawa, H. Hirai, K. Nagano, H. Harada, and K. Aihara: ¡ÈOptimization for Centralized and Decentralized Cognitive Radio Networks,¡É Proceedings of the IEEE, Vol.102, No.4, pp.574-584 (2014).
  102. M. Sekikawa, N. Inaba, K. Kamiyama, and K. Aihara: "Three-dimensional Tori and Arnold Tongues," Chaos, Vol.24, No.1, 013137 (2014).
  103. R. Sugawara, H. San, K. Aihara, and M. Hotta: ¡ÈExperimental Implementation of Non-binary Cyclic ADCs with Radix-value Estimation Algorithm,¡É IEICE Trans on Electronics, Vol.E97-C, No.4, pp.308-315 (2014).
  104. A. Sharma, M.D. Shrimali, and K. Aihara: "Effect of Mixed Coupling on Relay-coupled R\"ossler and Lorenz Oscillators," Physical Review E, Vol.90, No.6, 062907, pp.1-6 (2014).
  105. M.A.S. Kamal, J. Imura, T. Hayakawa, A. Ohata, and K. Aihara: "A Vehicle-Intersection Coordination Scheme for Smooth Flows of Traffic without Using Traffic Lights," IEEE Transactions on Intelligent Transportation Systems, Vol.16, No.3, pp.1136-1147 (2015).
  106. R. Liu, X. Wang, K. Aihara, and L. Chen: "Early Diagnosis of Complex Diseases by Molecular Biomarkers, Network Biomarkers, and Dynamical Network Biomarkers,¡É Medicinal Research Reviews, Vol.34, No.3, pp.455-478 (2014).
  107. G. Tanaka, K. Morino, H. Daido, K. Aihara: ¡ÈDynamical Robustness of Coupled Heterogeneous Oscillators,¡É Physical Review E, Vol. 89, 052906-1-8 (2014).
  108. H. Ikeda, R.J. de Boer, K. Sato, S. Morita, N. Misawa, Y. Koyanagi, K. Aihara, and S. Iwami: ¡ÈImproving the Estimation of the Death Rate of Infected Cells from Time Course Data during the Acute Phase of Virus Infections: Application to Acute HIV-1 Infection in a Humanized Mouse Model,¡É Theoretical Biology and Medical Modelling, Vol.11, Article No.22, pp.1-14 (2014).
  109. Y. Hirata, S. Azuma, and K. Aihara: ¡ÈModel Predictive Control for Optimally Scheduling Intermittent Androgen Suppression of Prostate Cancer,¡É Methods, Vol.67, No.3, pp.278-281 (2014).
  110. R. Liu, X. Yu , X. Liu, D. Xu, K. Aihara, and L. Chen: ¡ÈIdentifying Critical Transitions of Complex Diseases based on a Single Sample,¡É Bioinformatics, Vol.30, No.11, pp.1579-1586 (2014).
  111. Y. Suzuki, D. Sakai, T. Nomura, Y. Hirata, and K. Aihara: ¡ÈA New Protocol for Intermittent Androgen Suppression Therapy of Prostate Cancer with Unstable Saddle-point Dynamics,¡É Journal of Theoretical Biology, Vol.350, pp.1-16 (2014).
  112. Y. Hirata, T. Yamada, J. Takahashi, K. Aihara, and H. Suzuki: "Online multi-step prediction for wind speeds and solar irradiation: evaluation of prediction errors," Renewable Energy, Vol.67, pp.35-39 (2014).
  113. S. Oya, K. Aihara, and Y. Hirata: ¡ÈAn Absolute Measure for a Key Currency,¡É Physica A, Vol.407, pp.15-23 (2014).
  114. T. Kobayashi, Y. Koizumi, J.S. Takeuchi, N. Misawa, Y. Kimura, S. Morita, K. Aihara, Y. Koyanagi, S. Iwami, and K. Sato: "Quantification of Deaminase Activity-dependent and -independent Restriction of HIV-1 Replication Mediated by APOBEC3F and APOBEC3G through Experimental-mathematical Investigation," Journal of Virogy, Vol.88, No.10, pp.5881-5587 (2014).
  115. T. Kohno and K. Aihara: "Silicon Neuronal Networks towards Brain-morphic Computers," IEICE NOLTA Journal, Vol.5, No.3, pp.379--390 (2014).
  116. G. Tanaka, C. Urabe, and K. Aihara: "Random and Targeted Interventions for Epidemic Control in Metapopulation Models," Scientific Reports, Vol.4, Article No.5522, pp.1-8 (2014).
  117. B. Liu, Z. Yuan, K. Aihara, and L. Chen: "Reinitiation Enhances Reliable Transcriptional Responses in Eukaryotes," Journal of the Royal Society Interface, Vol.11, No.97, 20140326 (2014).
  118. B. Wang, G. Tanaka, H. Suzuki, and K. Aihara: "Epidemic Spread on Interconnected Metapopulation Networks," Physical Review E, Vol.90, 032806-1-12 (2014).
  119. M.A.S. Kamal, J. Imura, A. Ohata, T. Hayakawa, and K. Aihara: "Network-wide Optimization of Traffic Signals Using Mixed Integer Programming, Journal of Robotics and Mechatronics, Vol.26, No.5, pp.607-615 (2014).
  120. Y. Hirata, K. Aihara, and H. Suzuki: "Predicting Multivariate Time Series in Real Time with Confidence Intervals: Applications to Renewable Energy," The European Physics Journal Special Topics, Vol.223, No.12, pp.2451-2460 (2014).
  121. D. Ito, T. Ueta, J. Imura, and K. Aihara: "Controlling Chaos of Hybrid Systems by Variable Threshold Values," International Journal of Bifurcation and Chaos, Vol.24, No.10, 1450125-1-12 (2014).
  122. Y. Tao, Q. Guo, and K. Aihara: ¡ÈA Partial Differential Equation Model and its Reduction to an Ordinary Differential Equation Model for Prostate Tumor Growth under Intermittent Hormone Therapy,¡É Journal of Mathematical Biology, Vol.69, pp.817-838 (2014).
  123. M. Nagata, N. Fujiwara, G. Tanaka, H. Suzuki, E. Kohda, and K. Aihara: "Node-wise Robustness against Fluctuations of Power Consumption in Power Grids," European Physical Journal Special Topic, Vol.223, No.12, pp.2549-2559 (2014).
  124. Y.D. Sato and K. Aihara: "Changes of Firing Rate Induced by Changes of Phase Response Curve in Bifurcation Transitions," Neural Computation, Vol.26, No.11, pp.2395--2418 (2014).
  125. S. Oya, K. Aihara, and Y. Hirata: "Forecasting Abrupt Changes in Foreign Exchange Markets: Method using Dynamical Network Marker," New Journal of Physics, Vol.16, 115015 (2014).
  126. H. Ma, K. Aihara, and L. Chen: "Detecting Causality from Nonlinear Dynamics with Short-term Time Series," Scientific Reports, Vol.4, Article No.7464, pp.1-10 (2014).
  127. J. Pena Ramirez, R.H.B. Fey, K. Aihara, H. Nijmeijer: "An Improved Model for the Classical Huygens' Experiment on Synchronization of Pendulum Clocks," Journal of Sound and Vibration, Vol.333, No.26, pp.7248-7266 (2014).
  128. H. Ma, T. Zhou, K. Aihara, and L. Chen: "Predicting Time Series from Short-term High-Dimensional Data," International Journal of Bifurcation and Chaos, Vol.24, No.12, 1430033-1-19 (2014--12).
  129. K. Kamiyama, M. Komuro, T. Endo, and K. Aihara: "Classification of Bifurcations of Quasi-periodic Solutions using Lyapunov Bundles," International Journal of Bifurcation and Chaos, Vol.24, No.12, 1430034-1-30 (2014).
  130. K. Aihara and Y. Hirata: "FOREWORD: Special Section on Complex Systems Modelling and its Transdisciplinary Applications," Nonlinear Theory and Its Applications, IEICE, Vol.6, No.1, p.1 (2015).
  131. K. Fujimoto and K. Aihara: "Bifurcation Avoidance Control of Stable Periodic Points using the Maximum Local Lyapunov Exponent," Nonlinear Theory and Its Applications, IEICE, Vol.6, No.1, pp.2-14 (2015).
  132. K. Fujiwara, H. Suzuki, T. Ikeguchi, and K. Aihara: "Method for Analyzing Time-varying Statistics on Point Process Data with Multiple Trials," Nonlinear Theory and Its Applications, IEICE, Vol.6, No.1, pp.38-46 (2015).
  133. T. Makino, Y. Iwata, K. Shinohara, Y. Jitsumatsu, M. Hotta, H. San, and K. Aihara: "Rigorous Estimates of Quantization Error for A/D Converters based on Beta-map," Nonlinear Theory and Its Applications, IEICE, Vol.6, No.1, pp.99-111 (2015).
  134. L. Speidel, R. Lambiotte, K. Aihara, and N. Masuda: "Steady State and Mean Recurrence Time for Random Walks on Stochastic Temporal Networks, Physical Review E, Vol.91, No.1, 012806-1-12 (2015).
  135. S. Nakano, Y. Hirata, K. Iwayama, and K. Aihara: "Intra-day Response of Foreign Exchange Markets After the Tohoku-Oki Earthquake," Physica A, Vol.419, pp.203-214 (2015).
  136. Y. Hirata, M. Shiro, N. Takahashi, K. Aihara, H. Suzuki, and P. Mas: "Approximating High-dimensional Dynamics by Barycentric Coordinates with Linear Programming," Chaos, Vol.25, 013114-1-15 (2015).
  137. T. Hatano, Y. Hirata, H. Suzuki, and K. Aihara: "Comparison between Mathematical Models of Intermittent Androgen Suppression for Prostate Cancer," Journal of Theoretical Biology, Vol.366, pp.33-45 (2015).
  138. H. Tsukada, H. Fujii, K. Aihara, and I. Tsuda: "Computational Model of Visual Hallucination in Dementia with Lewy Bodies," Neural Networks, Vol.62, pp.73-82 (2015).
  139. R. Hosaka, T. Nakajima, K. Aihara, Y. Yamaguchi, and H. Mushiake: "Arm-use Dependent Lateralization of Gamma and Beta Oscillations in Primate Medial Motor Areas," Neural Networks, Vol.62, pp.62--66 (2015).
  140. G. Cao, L. Chen, and K. Aihara: "Power System Voltage Stability Assessment based on Branch Active Powers," IEEE Transactions on Power Systems, Vol.20, No.2, pp.989-996 (2015).
  141. T. Leleu and K. Aihara: "Unambiguous Reconstruction of Network Structure using Avalanche Dynamics," Physical Review E, Vol.91, No.2, 022804, pp.1-12 (2015).
  142. H. Kitajima, T. Yoshinaga, J. Imura, and K. Aihara: "Robust Bifurcation Analysis based on Optimization of Degree of Stability," International Journal of Innovative Computing, Information and Control, Vol.11, No.1, pp.153-162 (2015).
  143. Y. Sughiyama, T.J. Kobayashi, K. Tsumura, and K. Aihara: "Pathwise Thermodynamic Structure in Population Dynamics," Physical Review E, Vol.91, 032120 (2015).
  144. M.K. Kajita, R. Yokota, K. Aihara, T.J. Kobayashi: "Experimental and Theoretical Bases for Mechanisms of Antigen Discrimination by T Cells," Biophysics, Vol.11, pp.85-92 (2015).
  145. T. Ishizaki, H. Sandberg, K. Kashima, J. Imura, K. Aihara: "Dissipativity-Preserving Model Reduction for Large-Scale Distributed Control Systems," IEEE Transactions on Automatic Control, Vol.60, No.4, pp.1023-1037 (2015).
  146. T. Sasai, K. Morino, G. Tanaka, J.A. Almendral, and K. Aihara: "Robustness of Oscillatory Behavior in Correlated Networks," PLOS ONE, Vol.10, No.4, e0123722, pp.1-21 (2015).
  147. T. Omi, Y. Ogata, Y. Hirata, and K. Aihara: "Intermediate-term Forecasting of Aftershocks from an Early Aftershock Sequence: Bayesian and Ensemble Forecasting Approaches," Journal of Geophysical Research Solid Earth, Vol.120, No.4, pp.2561-2578 (2015).
  148. R. Yokota, K. Aihara, R. Kanzaki, and H. Takahashi: "Learning-Stage-Dependent Plasticity of Temporal Coherence in the Auditory Cortex of Rats," Brain Topography, Vol.28, No.3, pp.401-410 (2015).
  149. D. Tanaka, H. Asahara, K. Aihara, and T. Kousaka: "Basic Properties of Two-Dimensional Composite Dynamical System with Spike Noise," Electronics and Communications in Japan, Vol.98, No.6, pp.26-35 (2015).
  150. K. Morino, Y. Hirata, R. Tomioka, H. Kashima, K. Yamanishi, N. Hayashi, S. Egawa, and K. Aihara: "Predicting Disease Progression from Short Biomarker Series using Expert Advice Algorithm," Scientific Reports, Vol.5, Article No.8953, pp.1--12 (2015).
  151. Y. Kakizoe, S. Nakaoka, C.A.A. Beauchemin, S. Morita, H. Mori, T. Igarashi, K. Aihara, T. Miura, and S. Iwami: "A Method to Determine the Duration of the Eclipse Phase for in Vitro Infection with a Highly Pathogenic SHIV Strain," Scientific Reports, Vol.5, Article No.10371, pp.1-14 (2015).
  152. T. Mitsui, M. Crucifix, and K. Aihara: "Bifurcations and Strange Nonchaotic Attractors in a Phase Oscillator Model of glacial interglacial Cycles," Physica D, Vol.306, pp.25-33 (2015).
  153. M.A. Dahlem, J. Kurths, M.D. Ferrari, K. Aihara, M. Scheffer, and A. May: "Understanding Migraine using Dynamic Network Biomarkers," Cephalalgia, Vol.35, No.7, pp.627-630 (2015).
  154. M. Inoue, J. Imura, K. Kashima, M. Suzuki, and Kazuyuki Aihara: "Absolute Instability of Lur'e Systems and its Application to Oscillation Analysis of Uncertain Genetic Networks," International Journal of Robust and Nonlinear Control, Vol.25, No.18, pp.3746-3762 (2015).
  155. Y. Hirata, K. Morino, K. Akakura, C.S. Higano, N. Bruchovsky, T. Gambol, S. Hall, G. Tanaka, and K. Aihara: "Intermittent Androgen Suppression: Estimating Parameters for Individual Patients Based on Initial PSA Data in Response to Androgen Deprivation Therapy," PLOS ONE, Vol.10, No.6, e0130372-1-15 (2015).
  156. M.A.S. Kamal, J. Imura, T. Hayakawa, A. Ohata, and K. Aihara: "A Vehicle-Intersection Coordination Scheme for Smooth Flows of Traffic Without Using Traffic Lights," IEEE Transactions on Intelligent Transportation Systems, Vol.16, No.3, pp.1136-1147 (2015).
  157. H. Ikeda, A. Godinho-Santos, S. Rato, B. Vanwalscappel, F. Clavel, K. Aihara, S. Iwami, and F. Mammano: "Quantifying the Antiviral Effect of IFN on HIV-1 Replication in Cell Culture," Scientific Reports, Vol.5, Article No.11761, pp.1-7 (2015).
  158. M. Inoue, H. Ikuta, S. Adachi, J. Imura, and K. Aihara: "A Computational Method for Robust Bifurcation Analysis and Its Application to Biomolecular Systems," International Journal of Bifurcation and Chaos, Vol.25, No.7, 1540012-1-11 (2015).
  159. B.-G. Zhang, G. Tanaka and K. Aihara, M. Honda, S. Kaneko, and L. Chen: "Dynamics of an HBV Model with Drug Resistance Under Intermittent Antiviral Therapy," International Journal of Bifurcation and Chaos, Vol.25, No.7, 1540011-1-12 (2015).
  160. T. Ishizaki, K. Kashima, A. Girard, J. Imura, L. Chen, K. Aihara: "Clustered Model Reduction of Positive Directed Networks," Automatica, Vol.59, pp.238-247 (2015).
  161. S. Iwami, K. Sato, S. Morita, H. Inaba, T. Kobayashi, J.S. Takeuchi, Y. Kimura, N. Misawa, F. Ren, Y. Iwasa, K. Aihara, and Y. Koyanagi: "Pandemic HIV-1 Vpu Overcomes Intrinsic Herd Immunity Mediated by Tetherin," Scientific Reports, Vol.5, Article No.12256, pp.1-8 (2015).
  162. Y. Hirata and K. Aihara: "Ability of Intermittent Androgen Suppression to Selectively Create a Non-trivial Periodic Orbit for a Type of Prostate Cancer Patients," Journal of Theoretical Biology, Vol.384, pp.147-152 (2015).
  163. N. Takahashi, Y. Hirata, K. Aihara, and P. Mas: "A Hierarchical Multi-oscillator Network Orchestrates the Arabidopsis Circadian System," Cell, Vol.163, No.1, pp.148-159 (2015).
  164. P. Chen, R. Liu, L. Chen, and K. Aihara: "Identifying Critical Differentiation State of MCF-7 Cells for Breast Cancer by Dynamical Network Biomarkers," Frontiers in Genetics, Vol.6, Article No.252, pp.1-7 (2015).
  165. M. Ohtaki, T. Tonda, and K. Aihara: "A two-phase Poisson Process Model and its Application to Analysis of Cancer Mortality among A-bomb Survivors," Mathematical Biosciences, Vol.268, pp.31-37 (2015).
  166. S. Iwami, J.S. Takeuchi, S. Nakaoka, F. Mammano, F. Clavel, H. Inaba, T. Kobayashi, N. Misawa, K. Aihara, Y. Koyanagi, K. Sato: "Cell-to-cell infection by HIV contributes over half of virus infection," eLife, Vol.4, e08150, pp.1-16 (2015).
  167. Y. Hirata, T. Takeuchi, S. Horai, H. Suzuki, and K. Aihara: "Parsimonious Description for Predicting High-dimensional Dynamics," Scientific Reports, Vol.5, Article No.15736, pp.1-6 (2015).
  168. M. Inoue, J. Imura, K. Kashima, M. Suzuki, and K. Aihara: "Absolute Instability of Lur'e Systems and its Application to Oscillation Analysis of Uncertain Genetic Networks," International Journal of Robust and Nonlinear Control, Vol.25, No.18, pp.3746-3762 (2015).
  169. R. Liu, P. Chen, K. Aihara, and L. Chen: "Identifying Early-warning Signals of Critical Transitions with Strong Noise by Dynamical Network Markers," Scientific Reports, Vol.5, Article No.17501, pp.1-13 (2015).
  170. T. Ueta, D. Ito, and K. Aihara: "Can a Pseudo Periodic Orbit Avoid a Catastrophic Transition?," International Journal of Bifurcation and Chaos, Vol.25, No.13, 1550185, pp.1-10 (2015).
  171. Y. Hirata and K. Aihara:"Edit Distance for Marked Point Processes Revisited: An Implementation by Binary Integer Programming," Chaos, Vol.25, No.12, 123117 (2015).
  172. M. Fukino, Y. Hirata and K. Aihara: "Coarse-graining Time Series Data: Recurrence Plot of Recurrence Plots and its Application for Music," Chaos, Vol.26, 023116-1-12 (2016).
  173. T. Sase, J.P. Ramirez, K. Kitajo, K. Aihara, and Y. Hirata: "Estimating the Level of Dynamical Noise in Time Series by using Fractal Dimensions," Physics Letters A, Vol.380, No.11-12, pp.1151-1163 (2016).
  174. Y. Hirata, K. Morino, T. Suzuki, Q. Guo, "System Identification and Parameter Estimation in Mathematical Medicine: Examples Demonstrated for Prostate Cancer," Quantitative Biology, Vol.4, No.1, pp.13-19 (2016).
  175. Y. Tone, H. Asahara, D. Ito, T. Ueta, K. Aihara, and T. Kousaka: "Calculation of Local Bifurcation Points in Piecewise Nonlinear Discrete-Time Dynamical Systems," Electronics and Communications in Japan, Vol.9, No.3, pp.22-30 (2016).
  176. D. Ito, T. Ueta, T. Kousaka, and K. Aihara: "Bifurcation Analysis of the Nagumo-Sato Model and its Coupled Systems," International Journal of Bifurcation and Chaos, Vol.28, No.3, 1630006-1-11 (2016).
  177. T.J. Kobayashi, R. Yokota, K. Aihara: "Feedback Regulation and Its Efficiency in Biochemical Networks," Journal of Statistical Physics, Vol.162, No.5, pp.1425-1449 (2016).
  178. C.I. Tajima, S. Tajima, K. Koida, H. Komatsu, K. Aihara, and H. Suzuki: "Population Code Dynamics in Categorical Perception," Scientific Reports, Vol.6, Article No.22536, pp.1-13 (2016).
  179. H. Ikeda, S. Nakaoka, R.J. de Boer, S. Morita, N. Misawa, Y. Koyanagi, K. Aihara, K. Sato, and S. Iwami: "Quantifying the Effect of Vpu on the Promotion of HIV-1 Replication in the Humanized Mouse Model," Retrovirology, Vol.13, Article No.23, pp.1-5 (2016).
  180. E. Fujioka, I. Aihara, M. Sumiya, K. Aihara, and S. Hiryu: "Echolocating Bats Use Future-target Information for Optimal Foraging," Proceedings of the National Academy of Sciences of the United States of America, Vol.113, No.17, pp.4848-4852 (2016).
  181. Y. Hirata and K. Aihara: "Predicting Ramps by Integrating Different Sorts of Information," The European Physical Journal Special Topics, Vol.225, No.3, pp.513-525 (2016).
  182. B. Wang, H. Suzuki, and K. Aihara: "Enhancing Synchronization Stability in a Multi-area Power Grid," Scientific Reports, Vol.6, 26596-1-11 (2016).
  183. K. Iwayama, L. Zhu, Y. Hirata, M. Aono, M. Hara, and K. Aihara: "Decision-making Ability of Physarum Polycephalum Enhanced by its Coordinated Spatiotemporal Oscillatory Dynamics," Bioinspiration & Biomimetics, Vol.11, No.3, 036001 (2016).
  184. T. Kohno, M. Sekikawa, J. Li, T. Nanami, and K. Aihara: "Qualitative-Modeling-Based Silicon Neurons and Their Networks," Frontiers in Neuroscience, Vol.10, Article No.273, pp.1-16 (2016).
  185. M. Komuro, K. Kamiyama, T. Endo, and K. Aihara: "Quasi-Periodic Bifurcations of Higher-Dimensional Tori," International Journal of Bifurcation and Chaos, Vol.26, No.7, 1630016-1-40 (2016).
  186. D. Collerton, J.-P. Taylor, I. Tsuda, H. Fujii, S. Nara, K. Aihara, and Y. Katori: "How Can We See Things That Are Not There? Current Insights into Complex Visual Hallucinations," Journal of Consciousness Studies, Vol.23, No.7-8, pp.195-227 (2016).
  187. R. Hosaka, T. Nakajima, K. Aihara, Y. Yamaguchi, and H. Mushiake: "The Suppression of Beta Oscillations in the Primate Supplementary Motor Complex Reflects a Volatile State During the Updating of Action Sequences," Cerebral Cortex, Vol.26, No.8, pp.3442-3452 (2016).
  188. Y. Hirata, J.M. Amigo, Y. Matsuzaka, R. Yokota, H. Mushiake, K. Aihara: "Detecting Causality by Combined Use of Multiple Methods: Climate and Brain Examples," PLOS ONE, Vol.11, No.7, e0158572, pp.1-15 (2016).
  189. T. Otsuki and K. Aihara: "New Variable Depth Local Search for Multiple Depot Vehicle Scheduling Problems," Journal of Heuristics, Vol.22, No.4, pp.567-585 (2016).
  190. Y. Shimada, Y. Hirata, T. Ikeguchi, and K. Aihara: "Graph Distance for Complex Networks," Scientific Reports, Vol.6, Article No.34944, pp.1-6 (2016).
  191. Y. Hirata, Arisa Oda, Kunihiro Ohta, and K. Aihara: "Three-dimensional Reconstruction of Single-cell Chromosome Structure using Recurrence Plots," Scientific Reports, Vol.6, Article No.34982, pp.1-9 (2016).
  192. Y. Hirata, K. Iwayama, and K. Aihara: "Possibility of Short-term Probabilistic Forecasts for Large Earthquakes Making Good Use of the Limitations of Existing Catalogs," Physical Review E, Vol.94, No.4, 042217, pp.1-14 (2016).
  193. P.L. McMahon, A. Marandi, Y. Haribara, R. Hamerly, C. Langrock, S. Tamate, T. Inagaki, H. Takesue, S. Utsunomiya, K. Aihara, R.L. Byer, M.M. Fejer, H. Mabuchi, and Y. Yamamoto: "A Fully-programmable 100-spin Coherent Ising Machine with All-to-all Connections," Science, Vol.354, No.6312, pp.614-617 (2016).
  194. T. Inagaki, Y. Haribara, K. Igarashi, T. Sonobe, S. Tamate, T. Honjo, A. Marandi, P.L. McMahon, T. Umeki, K. Enbutsu, O. Tadanaga, H. Takenouchi, K. Aihara, K. Kawarabayashi, K. Inoue, S. Utsunomiya, and H. Takesue: "A Coherent Ising Machine for 2000-node Optimization Problems," Science, Vol.354, No.6312, pp.603-606 (2016).
  195. K. Inoue, H. Shinohara, M. Behar, N. Yumoto, G. Tanaka, A. Hoffmann, K. Aihara, and M. Okada-Hatakeyama: "Oscillation Dynamics Underlie Functional Switching of NF-$\kappa$B for B-cell Activation," Systems Biology and Applications, Vol.2, Article No.16024, pp.1-9 (2016).
  196. T. Omi, Y. Ogata, K. Shiomi, B. Enescu, K. Sawazaki, and K. Aihara: "Automatic Aftershock Forecasting: A Test Using Real-Time Seismicity Data in Japan," Bulletin of the Seismological Society of America, Vol.106, No.6, pp.2450-2458 (2016).
  197. H. Sakaguchi, K. Ogata, T. Isomura, S. Utsunomiya, Y. Yamamoto, and K. Aihara: "Boltzmann Sampling by Degenerate Optical Parametric Oscillator Network for Structure-Based Virtual Screening," Entropy, Vol.18, No.10, Article No.365, pp.1-11 (2016).
  198. C.T. Urabe, G. Tanaka, K. Aihara, and M. Mimura: "Parameter Scaling for Epidemic Size in a Spatial Epidemic Model with Mobile Individuals," PLOS ONE, Vol.11, No.12, e0168127, pp.1-16 (2016).
  199. X. Liu, Y. Wang, H. Ji, K. Aihara, and L. Chen: "Personalized Characterization of Diseases using Sample-specific Networks," Nucleic Acids Research, Vol.44, No.22, e164, pp.1-18 (2016).
  200. J.M. Amigó, Y. Hirata, and K. Aihara: "On the Limits of Probabilistic Forecasting in Nonlinear Times Series Analysis," Chaos, Vol.26, No.12, pp.123114-1-7 (2016).
  201. Takashi Kohno, Munehisa Sekikawa, and Kazuyuki Aihara: "A Configurable Qualitative-modeling-based Silicon Neuron Circuit," IEICE NOLTA Journal, Vol.8, No.1, pp.25-37 (2017).
  202. T. Yuan, K. Aihara, and G. Tanaka: "Robustness and Fragility in Coupled Oscillator Networks under Targeted Attacks," Physical Review E, Vol.95, No.1, 012315, pp.1-6 (2017).
  203. K. Iwayama, Y. Hirata, and K. Aihara: "Definition of Distance for Nonlinear Time Series Analysis of Marked Point Process Data," Physics Letters A, Vol.381, pp.257-262 (2017).
  204. H. San, R. Sugawara, M. Hotta, T. Matsuura, and K. Aihara: "A 12-bit 1.25MS/s Area-Efficient Radix-Value Self-Estimated Non-Binary Cyclic ADC with Relaxed Requirements on Analog Components," IEICE Transactions on Fundamentals of Electronics, Communications and Computer Sciences, Vol.E100-A, No.2, pp.534-540 (2017).
  205. T. Leleu, Y. Yamamoto, S. Utsunomiya, and K. Aihara: "Combinatorial Optimization using Dynamical Phase Transitions in Driven-dissipative Systems," Physical Review E, Vol.95, No.2, 022118, pp.1-18 (2017).
  206. M. Nagata, Y. Hirata, N. Fujiwara, G. Tanaka, H. Suzuki, and K. Aihara: "Smoothing Effect for Spatially Distributed Renewable Resources and its Impact on Power Grid Robustness," Chaos, Vol.27, Article No.033104, pp.1-7 (2017).
  207. K. Kamiyama, M. Komuro, and K. Aihara: "Homoclinic Cycle Bifurcations in Planar Maps," International Journal of Bifurcation and Chaos, Vol.27, No.3, 1730012, pp.1-11 (2017).
  208. T. Sase, Y. Katori, M. Komuro, and K. Aihara: "Bifurcation Analysis on Phase-Amplitude Cross-Frequency Coupling in Neural Networks with Dynamic Synapses," Frontiers Computational Neuroscience, Vol.11, Article No.1830, pp.1-19 (2017).
  209. Y. Li, M. Oku, G. He, and K. Aihara: "Elimination of Spiral Waves in a Locally Connected Chaotic Neural Network by a Dynamic Phase Space Constraint," Neural Networks, Vol.88, pp.9-21 (2017).
  210. Y. Hirata and K. Aihara: "Improving Time Series Prediction of Solar Irradiance after Sunrise: Comparison among Three Methods for Time Series Prediction," Solar Energy, Vol.149, pp.294-301 (2017).
  211. P. Christodoulides, Y. Hirata, E. Domínguez-Hüttinger, S.G. Danby, M.J. Cork, H.C. Williams, K. Aihara, and R.J. Tanaka: "Computational Design of Treatment Strategies for Proactive Therapy on Atopic Dermatitis using Optimal Control Theory," Philosophical Transactions of the Royal Society Series A, Vol.375, No.2096, DOI: 10.1098/rsta.2016.0285 (2017).
  212. H.-L. Zou, Z.-C. Deng, W.-P. Hu, K. Aihara, and Y.-C. Lai: "Partially Unstable Attractors in Networks of Forced Integrate-and-fire Oscillators," Nonlinear Dynamics, Vol.89, No.2, pp.887-900 (2017).
  213. X. Liu, X. Chang, R. Liu, X. Yu, L. Chen, and K. Aihara: "Quantifying Critical States of Complex Diseases using Single-sample Dynamic Network Biomarkers," PLOS Computational Biology, Vol.13, No.7, e1005633, pp.1-21 (2017).
  214. T. Omi, Y. Hirata, and K. Aihara: "Hawkes Process Model with a Time-dependent Background Rate and its Application to High-frequency Financial Data," Physical Review E, Vol.96, Article No.012303, pp.1-10 (2017).
  215. M.K. Kajita, K. Aihara, and T.J. Kobayashi: "Balancing Specificity, Sensitivity, and Speed of Ligand Discrimination by Zero-order Ultraspecificity," Physical Reveiw E, Vol.96, No.1, 012405, pp.1-14 (2017).
  216. S. Tajima, K. Koida, C.I. Tajima, H. Suzuki, K. Aihara, and H. Komatsu: "Task-dependent Recurrent Dynamics in Visual Cortex," eLife Vol.6, e26868, pp.1-28 (2017).
  217. Y. Haribara, H. Ishikawa, S. Utsunomiya, K. Aihara, and Y. Yamamoto: "Performance Evaluation of Coherent Ising Machines Against Classical Neural Networks," Quantum Science and Technology, Vol.2, No.4, 044002, pp.1-8 (2017).
  218. J.M. Amigó, Y. Hirata, and K. Aihara: "On the Limits of Probabilistic Forecasting in Nonlinear Time Series Analysis II: Differential Entropy," Chaos, Vol.27, No.8, 083125, pp.1-9 (2017).
  219. F. Duan, K. Watanabe, Y. Yoshimura, M. Kikuchi, Y. Minabe, K. Aihara: "Detection of Atypical Network Development Patterns in Children with Autism Spectrum Disorder using Magnetoencephalography," PLOS ONE, Vol.12, No.9, e0184422, pp.1-25 (2017).
  220. Y. Hirata and K. Aihara: "Dimensionless Embedding for Nonlinear Time Series Analysis," Physical Review E, Vol.96, No.3, 032219, pp.1-15 (2017).
  221. M. Xu, Y. Katori, and K. Aihara: "Stability Analysis on Sparsely Encoded Associative Memory with Short-Term Synaptic Dynamics," International Journal of Bifurcation and Chaos, Vol.27, No.10, 1730034, pp.1-18 (2017).
  222. T. Shoji, K. Aihara, and Y. Yamamoto: "Quantum Model for Coherent Ising Machines: Stochastic Differential Equations with Replicator Dynamics," Physical Review A, Vol.96, No.5, 053833, pp.1-8 (2017).
  223. A. Yamamura, K. Aihara, and Y. Yamamoto: "Quantum Model for Coherent Ising Machines: Discrete-time Measurement Feedback Formulation," Physical Review A, Vol.96, No.5, 053834, pp.1-8 (2017).
  224. Y. Yamamoto, K. Aihara, T. Leleu, K. Kawarabayashi, S. Kako, M. Fejer, Kyo Inoue, and Hiroki Takesue: "Coherent Ising Machines -- Optical Neural Networks Operating at the Quantum Limit," NPJ Quantum Information, Vol.3, Article No.49, pp.1-15 (2017).
  225. B. Schäfer, C. Beck, K. Aihara, D. Witthaut, and M. Timme: "Non-Gaussian Power Grid Frequency Fluctuations Characterized by Lévy-stable Laws and Superstatistics," Nature Energy, Vol.3, No.2, pp.119-126 (2018) (arxiv:1807.08496).
  226. H. Sakaguchi, S. Tamate, Y. Yamamoto, K. Aihara, and S. Utsunomiya: "Community Detection by Laser Network Dynamics, Journal of Physics Communications, Vol.2, No.1, 015005, pp.1-8 (2018).
  227. Y. Hirata, K. Morino, K. Akakura, C.S. Higano, and K. Aihara: "Personalizing Androgen Suppression for Prostate Cancer Using Mathematical Modeling"," Scientific Reports, Vol.8, Article No.2673, pp.1-8 (2018).
  228. T. Levi, Y. Guo, K. Aihara, and T. Kohno: "Study of Real-time Biomimetic CPG on FPGA: Behavior and Evolution," Journal of Robotics Networking and Artificial Life, Vol.4, No.4, pp.299-302 (2018).
  229. K. Aihara (Invited): "Recent Progress in Mathematical Modelling of Complex Systems," Nonlinear Theory and Its Applications, IEICE, Vol.9, No.2, pp.149-154 (2018).
  230. M. Oku and K. Aihara: "On the Covariance Matrix of the Stationary Distribution of a Noisy Dynamical System," Nonlinear Theory and Its Applications, IEICE, Vol.9, No.2, pp.166-184 (2018).
  231. S. Uenohara, T. Morie, H. Tamukoh, and K. Aihara: "A Pulse-width-modulation Mode CMOS Integrated Circuit Implementation of Threshold-coupled Map," Nonlinear Theory and Its Applications, IEICE, Vol.9, No.2, pp.268-280 (2018).
  232. T. Leleu, T. Levi, T. Kohno, and K. Aihara: "Network Structure Reconstruction using Packets of Spikes in Cultured Neuronal Networks Coupled to Microelectrode Arrays," Nonlinear Theory and Its Applications, IEICE, Vol.9, No.2, pp.281-294 (2018).
  233. H. Sugahara, N. Kamata, Y. Toda, M. Kato, and K. Aihara: "[[Integration of Incinerator Plants and Utilization of Forest Biomass on the Basis of FIT,>https://onlinelibrary.wiley.com/doi/full/10.1002/eej.22991 Electrical Engineering in Japan, Vol.202, No.1, pp.11--28 (2018). (Translated from Denki Gakkai Ronbunshi, Vol.135-B, No.4, pp.213--223 (2015).
  234. T. Levi, T. Nanami, A. Tange, K. Aihara, and T. Kohno: "Development and Applications of Biomimetic Neuronal Networks Toward BrainMorphic Artificial Intelligence," IEEE Transactions on Circuits and Systems-II: Express Briefs, Vol.65, No.5, pp.577-581 (2018).
  235. D. Ito, T. Ueta, K. Aihara: "Bifurcation Analysis of Eight Coupled Degenerate Optical Parametric Oscillators," Physica D, Vol.372, pp.22-30 (2018).
  236. G. Tanaka, E. Dominguez-Huttinger, P. Christodoulides, K. Aihara, and R.J. Tanaka: "Bifurcation Analysis of a Mathematical Model of Atopic Dermatitis to Determine Patient-specific Effects of Treatments on Dynamic Phenotypes," Journal of Theoretical Biology, Vol.448, pp.66-79 (2018).
  237. H. Ma, S. Leng, K. Aihara, W. Lin, and L. Chen: "Randomly Distributed Embedding Making Short-term High-dimensional Data Predictable," Proceedings of the National Academy of Sciences of the United States of America, Vol.115, No.43, pp.E9994-E10002 (2018-10-8).
  238. H. Miyahara and K. Aihara: "Work Relations with Measurement and Feedback Control on Nonuniform Temperature Systems," Physical Review E, Vol.98, 042138-1-6 (2018-10-23).
  239. R. Liu, J. Wang, M. Ukai, K. Sewon, P. Chen, Y. Suzuki, H. Wang, K. Aihara, M. Okada-Hatakeyama, L. Chen: "Hunt for the Tipping Point during Endocrine Resistance Process in Breast Cancer by Dynamic Network Biomarkers," Journal of Molecular Cell Biology, mjy059, pp.1-16 (2018).
  240. N. Sviridova, T. Zhao, K. Aihara, K. Nakamura, and A. Nakano: "Photoplethysmogram at Green Light: Where Does Chaos Arise from?" Chaos, Solitons & Fractals, Vol.116, pp.157-165 (2018).
  241. K. Morino, G. Tanaka, and K. Aihara: "Bifurcation Mechanism for Emergence of Spontaneous Oscillations in Coupled Heterogeneous Excitable Units," Physical Review E, Vol.98, No.5, 052210-1-15 (2018).
  242. X. Liu, X. Chang, S. Leng, H. Tang, K. Aihara, and L. Chen: "Detection for Disease Tipping Points by Landscape Dynamic Network Biomarkers," National Science Review, nwy162 (2018).
  243. S. Tsuji and K. Aihara: "Criterion for Determining the Optimal Delay of Attractor Reconstruction using Persistent Homology," Nonlinear Theory and Its Applications, IEICE, No.10, No.1, pp.74-89 (2019).
  244. T. Omi, Y. Ogata, K. Shiomi, B. Enescu, K. Sawazaki, and K. Aihara: "Implementation of a Real-Time System for Automatic Aftershock Forecasting in Japan," Seismological Research Letters, Vol.90, No.1, pp.242-250 (2019).
  245. T. Leleu, Y. Yamamoto, P.L. McMahon, and K. Aihara: "Destabilization of Local Minima in Analog Spin Systems by Correction of Amplitude Heterogeneity," Physical Review Letters, Vol.122, 040607-1-6 (2019).
  246. S. Okuno, K. Aihara, and Y. Hirata: "Combining Multiple Forecasts for Multivariate Time Series via State-dependent Weighting," Chaos, Vol.29, No.3, 033128-1-11 (2019).
  247. Y. Li, H. Kokubu, and K. Aihara: "Explicit Transversality Conditions and Local Bifurcation Diagrams for Bogdanov -- Takens Bifurcation on Center Manifolds," Physica D, Vol.39, pp.52-65 (2019).
  248. K. Koizumi, M. Oku, S. Hayashi, A. Inujima, N. Shibahara, L. Chen, Y. Igarashi, K. Tobe, S. Saito, M. Kadowaki, and K. Aihara: "Identifying Pre-disease Signals Before Metabolic Syndrome in Mice by Dynamical Network Biomarkers," Scientific Reports, Vol.9, Article No.8767, pp.1-11 (2019).
  249. H. Tamura, Y. Katori, K. Aihara: "Possible Mechanism of Internal Visual Perception: Context-dependent Processing by Predictive Coding and Reservoir Computing Network," Journal of Robotics, Networking and Artificial Life, Vol.6, No.1, pp.42-47 (2019).
  250. T. Kanamaru and K. Aihara: "Acetylcholine-mediated Top-down Attention Improves the Response to Bottom-up Inputs by Deformation of the Attractor Landscape," PLOS ONE, Vol.14, No.10, e0223592, pp.1-23 (2019).
  251. T. Matsumori, H. Sakai, and K. Aihara: "Early-warning Signals using Dynamical Network Markers Selected by Covariance," Physical Review E, Vol.100, No.5, 052303, pp.1-9 (2019).
  252. J. Shi, T. Li, L. Chen, and K. Aihara: "Quantifying Pluripotency Landscape of Cell Differentiation from scRNA-seq Data by Continuous Birth-death Process," PLOS Computational Biology, Vol.15, No.11, pp.1-17 (2019).
  253. K. Tokuda, Y. Katori, and K. Aihara: "Chaotic Dynamics as a Mechanism of Rapid Transition of Hippocampal Local Field Activity between Theta and Non-theta States," Chaos, Vol.29, No.11, 113115, pp.1-16 (2019).
  254. Y. Itoh, S. Uenohara, M. Adachi, T. Morie, and K. Aihara: "Reconstructing Bifurcation Diagrams Only from Time-series Data Generated by Electronic Circuits in Discrete-time Dynamical Systems," Chaos, Vol.30, No.1, 013128-1-11 (2020).
  255. S. Okuno, K. Aihara, and Y. Hirata: "Forecasting high-dimensional Dynamics Exploiting Suboptimal Embeddings," Scientific Reports, Vol.10, Article No.664, pp.1-11 (2020).
  256. M.K. Kajita, K. Aihara, and T.J. Kobayashi: "Reliable Target Ligand Detection by Noise-induced Receptor Cluster Formation," Chaos: An Interdisciplinary Journal of Nonlinear Science, Vol.30, No.1, 011104-1-6 (2020).
  257. H. Yamashita, K. Aihara, and H. Suzuki: "Timescales of Boolean Satisfiability Solver using Continuoustime Dynamical System," Communications in Nonlinear Science and Numerical Simulation, Vol.84, Article No.105183 (2020).
  258. S. Leng, H. Ma, J. Kurts, Y.-C. Lai, W. Lin, K. Aihara, and L. Chen: "Partial Cross Mapping Eliminates Indirect Causal Influences," Nature Communications, Vol.11, Article No.2632, pp.1-9 (2020).
  259. Pei Chen, Rui Liu, Kazuyuki Aihara, and Luonan Chen: "Autoreservoir Computing for Multistep Ahead Prediction based on the Spatiotemporal Information Transformation," Nature Communications, Vol.11, Article No.4568, pp.1-15 (2020).
  260. Yusuke Sakemi, Kai Morino, Timothee Leleu, and Kazuyuki Aihara: "Model-size reduction for reservoir computing by concatenating internal states through time," Scientific Reports, Vol.10, Article No.21794, pp.1-13 (2020).
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