Laboratories for Mathematics, Lifesciences, and Informatics

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#author("2021-04-23T19:39:14+09:00","","")
*News ([[>>more>./News]])[#ke2d2b5e]
-Takahiro Inagaki, Kensuke Inaba, Timoth\'ee Leleu, Toshimori Honjo, Takuya Ikuta, Koji Enbutsu, Takeshi Umeki, Ryoichi Kasahara, 
-Takahiro Inagaki, Kensuke Inaba, Timothee Leleu, Toshimori Honjo, Takuya Ikuta, Koji Enbutsu, Takeshi Umeki, Ryoichi Kasahara, 
Kazuyuki Aihara, and Hiroki Takesue: [["Collective and Synchronous Dynamics of Photonic Spiking Neurons,">https://www.nature.com/articles/s41467-021-22576-4]] Nature Communications, Vol.12, Article No.2325, pp.1-8  (2021). 
-Keisuke Ejima, Kwang Su Kim, Shoya Iwanami, Yasuhisa Fujita, Ming Li, Roger S. Zoh, Kazuyuki Aihara, Taiga Miyazaki, Takaji Wakita and Shingo Iwami: [["Time Variation in the Probability of Failing to Detect a Case of Polymerase Chain Reaction Testing for SARS-CoV-2 as Estimated from a Viral Dynamics Model,">https://royalsocietypublishing.org/doi/10.1098/rsif.2020.0947]] Journal of the Royal Society Interface, Vol.8, No.177, 20200947, pp.1-7 (2021). 
-Rui Liu, Jiayuan Zhong, Renhao Hong, Ely Chen, Kazuyuki Aihara, Pei Chen, and Luonan Chen: [["Predicting local COVID-19 Outbreaks and Infectious Disease Epidemics based on Landscape Network Entropy,">https://www.sciencedirect.com/science/article/pii/S2095927321002413?dgcid=author]] Science Bulletin, doi:10.1016/j.scib.2021.03.022 (2021). 
-Japan Times [["Fourth wave takes shape as COVID-19 cases increase across Japan ">https://www.japantimes.co.jp/news/2021/03/31/national/fourth-wave-coronavirus-japan/]]. 
-Shunya Okuno, Koji Ikeuchi, Kazuyuki Aihara: [["Practical Data¡¾Driven Flood Forecasting Based on Dynamical Systems Theory,">https://agupubs.onlinelibrary.wiley.com/doi/10.1029/2020WR028427]] Water Resources Research, Vol.57, No.3, e2020WR028427, pp.1-18 (2021). 
-Daisuke Inoue, Akihisa Okada, Tadayoshi Matsumori, Kazuyuki Aihara, and Hiroaki Yoshida: [["Traffic Signal Optimization on a Square Lattice with Quantum Annealing,">https://www.nature.com/articles/s41598-021-82740-0]] 
Scientific Reports, Vol.11, Article No.3303, pp.1-12 (2021). 
-Yusuke Sakemi, Kai Morino, Timothee Leleu, and Kazuyuki Aihara: 
[["Model-size reduction for reservoir computing by concatenating internal states through time,">https://www.nature.com/articles/s41598-020-78725-0]] Scientific Reports, Vol.10, Article No.21794, pp.1-13 (2020). 
-Pei Chen, Rui Liu, Kazuyuki Aihara, and Luonan Chen: [["Autoreservoir computing for multistep ahead prediction based on the spatiotemporal information transformation,">https://doi.org/10.1038/s41467-020-18381-0]] Nature Communications, Vol.11, Article No.4568, pp.1-15 (2020). 
-S. Leng, H. Ma, J. Kurts, Y.-C. Lai, W. Lin, K. Aihara, and L. Chen: [["Partial Cross Mapping Eliminates Indirect Causal Influences,">https://www.nature.com/articles/s41467-020-16238-0]] Nature Communications, Vol.11, Article No.2632, pp.1-9 (2020). 
-Y. Itoh, S. Uenohara,  M. Adachi,  T. Morie, and  K. Aihara: [["Reconstructing Bifurcation Diagrams Only from Time-series Data Generated by Electronic Circuits in Discrete-time Dynamical Systems,">https://aip.scitation.org/doi/10.1063/1.5119187]] Chaos, Vol.30, No.1, 013128-1-11 (2020).
-M.K. Kajita, K. Aihara, and T.J. Kobayashi: [["Reliable Target Ligand Detection by Noise-induced Receptor Cluster Formation,">https://doi.org/10.1063/1.5140714]] Chaos: An Interdisciplinary Journal of Nonlinear Science, Vol.30, No.1, 011104-1-6 (2020).
-S. Okuno, K. Aihara, and Y. Hirata: [["Forecasting high-dimensional Dynamics Exploiting Suboptimal Embeddings,">https://www.nature.com/articles/s41598-019-57255-4]] Scientific Reports, Vol.10, Article No.664, pp.1-11 (2020).
-T. Leleu, Y. Yamamoto, P.L. McMahon, and K. Aihara: [["Destabilization of Local Minima in Analog Spin Systems by Correction of Amplitude Heterogeneity,">https://journals.aps.org/prl/abstract/10.1103/PhysRevLett.122.040607]] Physical Review Letters, Vol.122, 040607-1-6 (2019). 
-S. Tsuji and K. Aihara: [["Criterion for Determining the Optimal Delay of Attractor Reconstruction using Persistent Homology,">https://www.jstage.jst.go.jp/article/nolta/10/1/10_74/_article]] Nonlinear Theory and Its Applications, IEICE, No.10, No.1, pp.74-89 (2019). 
-H. Ma, S. Leng, K. Aihara, W. Lin, and L. Chen: [["Randomly Distributed Embedding Making Short-term High-dimensional Data Predictable,">http://www.pnas.org/content/early/2018/10/04/1802987115]] Proceedings of the National Academy of Sciences of the United States of America, Vol.115, No.43, pp.E9994-E10002 (2018). 
-&ref("Laboratories for Mathematics, Lifesciences, and Informatics/maass20181112-A4.pdf",,,Special Seminar by Prof. Dr. Wolfgang Maass:"How do networks of spiking neurons compute and learn?"); will be held on November 12th, 2018 ([[registration>https://goo.gl/forms/8i2p7YzYmFIAiNjf1]]).  
-D. Ito, T. Ueta, K. Aihara: [["Bifurcation Analysis of Eight Coupled Degenerate Optical Parametric Oscillators,">https://doi.org/10.1016/j.physd.2018.01.010]] Physica D, Vol.372, pp.22-30 (2018). 
-[["Special issue on The second step of the FIRST,">http://www.nolta.ieice.org/]] Nonlinear Theory and Its Applications, IEICE, Vol.9, No.2 (2018).
-&ref("Laboratories for Mathematics, Lifesciences, and Informatics/180305_workshop_program_fin.pdf",,,International Workshop on Early-warning signals from Fundamentals to Applications); was held at IIS on March 5-6th, 2018. 
-Y. Hirata, K. Morino, K. Akakura, C.S. Higano, and K. Aihara: [["Personalizing Androgen Suppression for Prostate Cancer Using Mathematical Modeling,">https://doi.org/10.1038/s41598-018-20788-1]] Scientific Reports, Vol.8, Article No.2673, pp.1-8 (2018). 
-B. Schäfer, C. Beck, K. Aihara, D. Witthaut, and M. Timme: [["Non-Gaussian Power Grid Frequency Fluctuations Characterized by Lévy-stable Laws and Superstatistics,">https://www.nature.com/articles/s41560-017-0058-z]] Nature Energy, Vol.3, No.2, pp.119-126 (2018) ([[arxiv:1807.08496>http://arxiv.org/abs/1807.08496]]). 
-A. Yamamura, K. Aihara, and Y. Yamamoto: [["Quantum Model for Coherent Ising Machines: Discrete-time Measurement Feedback Formulation,">https://journals.aps.org/pra/abstract/10.1103/PhysRevA.96.053834]] Physical Review A, Vol.96, No.5, 053834, pp.1-8 (2017).
-T. Shoji, K. Aihara, and Y. Yamamoto: [["Quantum Model for Coherent Ising Machines: Stochastic Differential Equations with Replicator Dynamics,">https://journals.aps.org/pra/abstract/10.1103/PhysRevA.96.053833]] Physical Review A, Vol.96, No.5, 053833, pp.1-8 (2017). 
-P. Christodoulides, Y. Hirata, E. Domínguez-Hüttinger, S.G. Danby, M.J. Cork, H.C. Williams, Kazuyuki Aihara, and R.J. Tanaka: [["Computational Design of Treatment Strategies for Proactive Therapy on Atopic Dermatitis using Optimal Control Theory,">http://rsta.royalsocietypublishing.org/content/375/2096/20160285]] Philosophical Transactions of the Royal Society Series A, Vol.375, No.2096 (2017).
-Y. Hirata and K. Aihara: [["Improving Time Series Prediction of Solar Irradiance after Sunrise: Comparison among Three Methods for Time Series Prediction,">http://www.sciencedirect.com/science/article/pii/S0038092X17303031]] Solar Energy, Vol.149, pp.294-301 (2017). 
-K. Kamiyama, M. Komuro, and K. Aihara: [["Homoclinic Cycle Bifurcations in Planar Maps,">http://www.worldscientific.com/doi/abs/10.1142/S0218127417300129]] International Journal of Bifurcation and Chaos, Vol.27, No.3, 1730012, pp.1-11 (2017). 
-M. Nagata, Y. Hirata, N. Fujiwara, G. Tanaka, H. Suzuki, and  K. Aihara: [["Smoothing effect for spatially distributed renewable resources and its impact on power grid robustness,">http://aip.scitation.org/doi/full/10.1063/1.4977510]] Chaos, Vol.27, Article No.033104 (2017). 
-Y. Li, M. Oku, G. He, and K. Aihara: [["Elimination of Spiral Waves in a Locally Connected Chaotic Neural Network by a Dynamic Phase Space Constraint,">https://authors.elsevier.com/a/1UUBX3BBjKS8et]] Neural Networks, Vol.88, pp.9-21 (2017). 
-T. Leleu, Y. Yamamoto, S. Utsunomiya, and K. Aihara: [["Combinatorial Optimization using Dynamical Phase Transitions in Driven-dissipative Systems,">https://journals.aps.org/pre/abstract/10.1103/PhysRevE.95.022118]] Physical Review E, Vol.95, No.2, pp.022118-1-18 (2017). 
-T. Yuan, K. Aihara, and G. Tanaka: [["Robustness and Fragility in Coupled Oscillator Networks under Targeted Attacks,">https://journals.aps.org/pre/abstract/10.1103/PhysRevE.95.012315]] Physical Review E, Vol.95, No.1, pp.012315-1-6 (2017). 
-J.M. Amigo, Y. Hirata, and K. Aihara: [["On the Limits of Probabilistic Forecasting in Nonlinear Times Series Analysis,">http://aip.scitation.org/doi/full/10.1063/1.4971412]] Chaos, Vol.26, No.12, pp.123114-1-7 (2016). 
-C.T. Urabe, G. Tanaka, K. Aihara, and M. Mimura: [["Parameter Scaling for Epidemic Size in a Spatial Epidemic Model with Mobile Individuals,">http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0168127]] PLOS ONE, Vol.11, No.12, e0168127, pp.1-16 (2016). 
-T. Inagaki, Y. Haribara, K. Igarashi, T. Sonobe, S. Tamate, T. Honjo, A. Marandi, P.L. McMahon, T. Umeki, K. Enbutsu, O. Tadanaga, H. Takenouchi, K. Aihara, K. Kawarabayashi, K. Inoue, S. Utsunomiya, and H. Takesue: [["A Coherent Ising Machine for 2000-node Optimization Problems,">http://science.sciencemag.org/content/354/6312/603]] Science, Vol.354, No.6312, pp.603-606 (2016).
-P.L. McMahon, A. Marandi, Y. Haribara, R. Hamerly, C. Langrock, S. Tamate, T. Inagaki, H. Takesue, S. Utsunomiya, K. Aihara, R.L. Byer, M.M. Fejer, H. Mabuchi, and Y. Yamamoto: [["A Fully-programmable 100-spin Coherent Ising Machine with All-to-all Connections,">http://science.sciencemag.org/content/354/6312/614]] Science, Vol.354, No.6312, pp.614-617 (2016). 





*For Applicants [#bbaea4d9]
Please see [[How to apply for our laboratories>./How to apply for our laboratories]]

//*Staffs
//-[[Professor Kazuyuki Aihara>¿ôÍýÀ¸Ì¿¾ðÊó³Ø¸¦µæ¼¼/¶µ°÷¾Ò²ð/¹ç¸¶°ì¹¬]]
//-[[Coordinate Professor Yoko Yamaguchi>¿ôÍýÀ¸Ì¿¾ðÊó³Ø¸¦µæ¼¼/¶µ°÷¾Ò²ð/»³¸ýÍÛ»Ò]]
//-[[Project Professor Yoichiro Takahashi>¿ôÍýÀ¸Ì¿¾ðÊó³Ø¸¦µæ¼¼/¶µ°÷¾Ò²ð/üⶶÍÛ°ìϺ]]
//-[[Visiting Professor Luonan Chen>¿ôÍýÀ¸Ì¿¾ðÊó³Ø¸¦µæ¼¼/¶µ°÷¾Ò²ð/ÄÄÍìÆî]]
//-[[Associate Professor Hideyuki Suzuki>¿ôÍýÀ¸Ì¿¾ðÊó³Ø¸¦µæ¼¼/¶µ°÷¾Ò²ð/ÎëÌÚ½¨¹¬]]
//-[[Associate Professor Takashi Kohno>¿ôÍýÀ¸Ì¿¾ðÊó³Ø¸¦µæ¼¼/¶µ°÷¾Ò²ð/²ÏÌî¿ò]]
//-[[Project Associate Professor Yoshito Hirata>¿ôÍýÀ¸Ì¿¾ðÊó³Ø¸¦µæ¼¼/¶µ°÷¾Ò²ð/Ê¿ÅľͿÍ]]
//-[[Associate Professor Tetsuya Kobayashi>¿ôÍýÀ¸Ì¿¾ðÊó³Ø¸¦µæ¼¼/¶µ°÷¾Ò²ð/¾®ÎÓÅ°Ìé]]

*Affiliation [#cda62507]
-[[Institute of Industrial Science>http://www.iis.u-tokyo.ac.jp/index_e.html]], 
[[The University of Tokyo>http://www.u-tokyo.ac.jp/index_e.html]]
-[[Department of Mathematical Informatics>http://www.i.u-tokyo.ac.jp/edu/course/mi/index_e.shtml]], 
[[Graduate School of Information Science and Technology>http://www.i.u-tokyo.ac.jp/index_e.shtml]], 
[[The University of Tokyo>http://www.u-tokyo.ac.jp/index_e.html]]
-[[Department of Electrical Engineering and Information Systems>http://www.eeis.t.u-tokyo.ac.jp/en/index.html]], 
[[Graduate School of Engineering>http://www.t.u-tokyo.ac.jp/soee/index.html]], [[The University of Tokyo>http://www.u-tokyo.ac.jp/index_e.html]]
-[[Department of Mathematical Engineering and Information Physics>http://www.keisu.t.u-tokyo.ac.jp/index-j.html]], 
[[Faculty of Engineering>http://www.t.u-tokyo.ac.jp/foe/index.html]], 
[[The University of Tokyo>http://www.u-tokyo.ac.jp/index_e.html]]
-[[Collaborative Research Center for Innovative Mathematical Modelling>http://www.sat.t.u-tokyo.ac.jp/center/en]], [[Institute of Industrial Science>http://www.iis.u-tokyo.ac.jp/index_e.html]], 
[[The University of Tokyo>http://www.u-tokyo.ac.jp/index_e.html]](March 4, 2010-March 31, 2018)

*Collaborative research [#q887a634]
-[[ERATO Aihara Complexity Modelling Project, JST>http://www.sat.t.u-tokyo.ac.jp/jst/index.html]]
-[[FIRST Aihara Innovative mathematical Modelling Project>http://www.sat.t.u-tokyo.ac.jp/first/en]]

*Academic-industrial alliance [#rbd9ff34]
-[[Social Cooperation Program "Energy Efficient Information Processing">http://eeip.t.u-tokyo.ac.jp/index-e.html]]
-Social Cooperation Program "Mathematical Engineering for Complex Social Systems in Future"
-Social Cooperation Program "Brain-Morphic AI to Resolve Social Issues"
-[[Aihara Electrical Engineering Co., Ltd.>http://www.aihara.co.jp/rdteam/index.html]]
-[[Sunday Chaos Times>http://www.aihara.co.jp/rdteam/sunday-chaostimes/index-j.html]]
-[[Anti spam service "+abmail">http://www.aihara.co.jp/rdteam/+abmail/]]

*Medical researches on humans [#s12a5fbc]
-&ref("Laboratories for Mathematics, Lifesciences, and Informatics/S13_IISkokai_2857(8)-EN.pdf",,,Study on recurrent dynamics of prostate cancer using mathematical models);


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