Laboratories for Mathematics, Lifesciences, and Informatics

数理生命情報学研究室/ 発表文献/ 論文 (英語) 2021年〜

1. Daisuke Inoue, Akihisa Okada, Tadayoshi Matsumori, Kazuyuki Aihara, and Hiroaki Yoshida: "Traffic Signal Optimization on a Square Lattice with Quantum Annealing," Scientific Reports, Vol.11, Article No.3303, pp.1-12 (2021).
2. Jifan Shi, Kazuyuki Aihara, and Luonan Chen: "Dynamics-Based data Science in Biology," National Science Review, Vol.8, No.5, nwab029-1-nwab029-3 (2021).
3. Mikio Hasegawa, Hirotake Ito, Hiroki Takesue, Kazuyuki Aihara (Invited Paper): "Optimization by Neural Networks in the Coherent Ising Machine and its Application to Wireless Communication Systems," IEICE Transactions on Communications, Vol.E104-B, No.3, pp.210-216 (2021).
4. Shunya Okuno, Koji Ikeuchi, Kazuyuki Aihara: "Practical Data‐Driven Flood Forecasting Based on Dynamical Systems Theory," Water Resources Research, Vol.57, No.3, e2020WR028427, pp.1-18 (2021).
5. Kwang Su Kim, Keisuke Ejima, Shoya Iwanami, Yasuhisa Fujita, Hirofumi Ohashi, Yoshiki Koizumi, Yusuke Asai, Shinji Nakaoka, Koichi Watashi, Kazuyuki Aihara, Robin N. Thompson, Ruian Ke, Alan S. Perelson, and Shingo Iwami: "A Quantitative Model Used to Compare Within-Host SARS-CoV-2, MERS-CoV and SARS-CoV Dynamics Provides Insights into the Pathogenesis and Treatment of SARS-CoV-2," PLOS Biology, Vol.19, No.3, e3001128, pp.1-19 (2021).
6. Keisuke Ejima, Kwang Su Kim, Shoya Iwanami, Yasuhisa Fujita, Ming Li, Roger S. Zoh, Kazuyuki Aihara, Taiga Miyazaki, Takaji Wakita and Shingo Iwami: "Time Variation in the Probability of Failing to Detect a Case of Polymerase Chain Reaction Testing for SARS-CoV-2 as Estimated from a Viral Dynamics Model," Journal of the Royal Society Interface, Vol.8, No.177, 20200947, pp.1-7 (2021).
7. Hirofumi Ohashi, Koichi Watashi, Wakana Saso, Kaho Shionoya, Shoya Iwanami, Takatsugu Hirokawa, Tsuyoshi Shirai, Shigehiko Kanaya, Yusuke Ito, Kwang Su Kim, Takao Nomura, Tateki Suzuki, Kazane Nishioka, Shuji Ando, Keisuke Ejima, Yoshiki Koizumi, Tomohiro Tanaka, Shin Aoki, Kouji Kuramochi, Tadaki Suzuki, Takao Hashiguchi, Katsumi Maenaka, Tetsuro Matano, Masamichi Muramatsu, Masayuki Saijo, Kazuyuki Aihara, Shingo Iwami, Makoto Takeda, Jane A. McKeating, and Takaji Wakita: "Potential anti-COVID-19 Agents, Cepharanthine and Nelfinavir, and their Usage for Combination Treatment," iScience, Vol.24, No.4, 102367, pp.1-14 (2021).
8. Takahiro Inagaki, Kensuke Inaba, Timothee Leleu, Toshimori Honjo, Takuya Ikuta, Koji Enbutsu, Takeshi Umeki, Ryoichi Kasahara, Kazuyuki Aihara, and Hiroki Takesue: "Collective and Synchronous Dynamics of Photonic Spiking Neurons," Nature Communications, Vol.12, Article No.2325, pp.1-8 (2021).
9. Seiji Uenohara and Kazuyuki Aihara:"Time-Domain Digital-to-Analog Converter for Spiking Neural Network Hardware," Circuits, Systems, and Signal Processing, Vol.40, pp.2763-2781 (2021).
10. Keisuke Ejima, Kwang Su Kim, Christina Ludema, Ana I. Bento, Shoya Iwanami, Yasuhisa Fujita, Hirofumi Ohashi, Yoshiki Koizumi, Koichi Watashi, Kazuyuki Aihara, Hiroshi Nishiurai, and Shingo Iwami: "Estimation of the Incubation Period of COVID-19 Using Viral Load Data," Epidemics, Vol.35, 100454, pp.1-6 (2021).
11. Shoya Iwanami, Keisuke Ejima, Kwang Su Kim, Koji Noshita, Yasuhisa Fujita, Taiga Miyazaki, Shigeru Kohno, Yoshitsugu Miyazaki, Shimpei Morimoto, Shinji Nakaoka, Yoshiki Koizumi, Yusuke Asai, Kazuyuki Aihara, Koichi Watashi, Robin N. Thompson, Kenji Shibuya, Katsuhito Fujiu, Alan S. Perelson, Shingo Iwami, and Takaji Wakita: "Detection of Significant Antiviral Drug Effects on COVID-19 with Reasonable Sample Sizes in Randomized Controlled Trials: A Modeling Study," PLOS Medicine, Vol.18, No.7, e1003660, pp.1-20 (2021).
12. Yong Dam Jeong, Keisuke Ejima, Kwang Su Kim, Shoya Iwanami, Ana I Bento, Yasuhisa Fujita, Il Hyo Jung, Kazuyuki Aihara, Koichi Watashi, Taiga Miyazaki, Takaji Wakita, Shingo Iwami, and Marco Ajelli: "Revisiting the Guidelines for Ending Isolation for COVID-19 Patients," eLife, Vol.10, e69340, pp.1-20 (2021).
13. Komei Kurasawa, Kota Hashimoto, Aohan Li, Koya Sato, Kensuke Inaba, Hiroki Takesue, Kazuyuki Aihara, and Mikio Hasegawa: "A High-Speed Channel Assignment Algorithm for Dense IEEE 802.11 Systems via Coherent Ising Machine," IEEE Wireless Communications Letters, Vol.10, No.8, pp.1682-1686 (2021).
14. Yoshito Hirata, José M. Amigó, Shunsuke Horai, Kazuhiko Ogimoto, and Kazuyuki Aihara: "Forecasting Wind Power Ramps with Prediction Coordinates," Chaos, Vol.31, No.10, 103105, pp.1-7 (2021).
15. Hiroshi Yamashita, Kazuyuki Aihara, and Hideyuki Suzuki: "Accelerating Numerical Simulation of Continuous-Time Boolean Satisfiability Solver using Discrete Gradient," Communications in Nonlinear Science and Numerical Simulation, Vol.102, 105908, pp.1-14 (2021).
16. Rui Liu, Jiayuan Zhong, Renhao Hong, Ely Chen, Kazuyuki Aihara, Pei Chen, and Luonan Chen: "Predicting local COVID-19 Outbreaks and Infectious Disease Epidemics based on Landscape Network Entropy," Science Bulletin, Vol.66, No.22, pp.2265-2270 (2021).
17. Timothée Leleu, Farad Khoyratee, Timothée Levi, Ryan Hamerly, Takashi Kohno, and Kazuyuki Aihara: "Scaling Advantage of Chaotic Amplitude Control for High-Performance Combinatorial Optimization," Communications Physics, Vol.4, Article No.266, pp.1-10 (2021).
18. Kazuyuki Aihara, Rui Liu, Keiichi Koizumi, Xiaoping Liu, and Luonan Chen: "Dynamical Network Biomarkers: Theory and Applications," Gene, Vol.808, Article No.145997, pp.1-10 (2021).
19. Nina Sviridova, Pietro Artoni, Michela Fagiolini, Takao K. Hensch, and Kazuyuki Aihara: "Dynamical Characteristics of Wild-Type Mouse Spontaneous Pupillary Fluctuations," Proceedings of 2021 43rd Annual International Conference of the IEEE Engineering in Medicine & Biology Society (EMBC), pp.853-856 (2021).
20. Jifan Shi, Kenji Kirihara, Mariko Tada, Mao Fujioka, Kaori Usui, Daisuke Koshiyama, Tsuyoshi Araki, Luonan Chen, Kiyoto Kasai, and Kazuyuki Aihara: "Criticality in the Healthy Brain," Frontier in Network Physiology, Vol.1, Article No.755685,pp.1-9 (2022).
21. Jifan Shi, Kazuyuki Aihara, and Luonan Chen: "Embedding Entropy: A Nonlinear Measure of Dynamical Causality," Journal of the Royal Society Interface, Vol.19, No.188, Article No.20210766, pp.1-12 (2022).
22. Yusuke Sakemi, Kai Morino, Takashi Morie, and Kazuyuki Aihara: "[[A Supervised Learning Algorithm for Multilayer Spiking Neural Networks Based on Temporal Coding Toward Energy-Efficient VLSI Processor Design>https://ieeexplore.ieee.org/document/9490311]]," IEEE Transactions on Neural Networks and Learning Systems, doi: 10.1109/TNNLS.2021.3095068, pp.1-15 (2022).
23. Seiji Uenohara and Kazuyuki Aihara: "A 18.7 TOPS/W Mixed-Signal Spiking Neural Network Processor With 8-bit Synaptic Weight On-Chip Learning That Operates in the Continuous-Time Domain," IEEE Access, Vol.10, pp.48338-48348 (2022).
24. Yang Li, Jifan Shi, and Kazuyuki Aihara: "Mean-Field Analysis of Stuart-Landau Oscillator Networks with Symmetric Coupling and Dynamical Noise," Chaos, Vol.32, No.6, Article No.063114, pp.1-23 (2022).